episcanpy.api.pl.overlap_heatmap

episcanpy.api.pl.overlap_heatmap(adata, key_1, key_2, color='Blues', norm=False, ax_norm='row', sort_index=False)

Heatmap of the cluster correspondance between 2 set of annaotations.

Parameters

adata : AnnData objet

key_1 : observational key corresponding to one cell division/ one set of clusters

key_2 : bservational key corresponding to one cell division/ one set of clusters

norm : normalisation on the total number of cells per row/column or not.

ax_norm : normalistion (if norm=True) on row or col

colors : gradient displayed in the heatmap. "YlGnBu", "BuPu", "Greens", "Blues"

Returns

Heatmap.