episcanpy.api.pp.read_ATAC_10x¶
- episcanpy.api.pp.read_ATAC_10x(matrix, cell_names='', var_names='', path_file='')¶
Load sparse matrix (including matrices corresponding to 10x data) as AnnData objects. read the mtx file, tsv file coresponding to cell_names and the bed file containing the variable names
- Parameters
- matrix : sparse count matrix
- cell_names : optional, tsv file containing cell names
- var_names : optional, bed file containing the feature names
- Returns
AnnData object